rs223067567 SNP Detail

Summary

• ID
  rs223067567
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129839943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTGACTT TAGTGACAAA
  AAAAAAAAGC TAATTTGGGT ACATGTTTTT GACCCATCCT TGCTTGGCAT TTTTCCAGTT
  TGGACAAGTG AAGCAGCCTT GTTCCAAGCT TTTAACCTTA AGGTAAAAAG AACATCAGAG
  ACTGTGTAAT CTGACTTAGC AAGATTAGTG ATTCTTCTCT TTCCCTCAAA TGACCGGTTA
  Y
  TCTAACTCAA TCGTGAACTG GTCTAGTAAT AATTTCAGTA TTAGAGTATC CCAGGGAAGA
  TAGCAAAATA TTCTTAATTA CTTACAAAGT TACATTAGAA CACAGCCTCC TCTCCCAGAA
  AGATTGCAGC CTTTCTGTGA TTCTCAAGGT CACCGCCCCC ACACCTGGAG CTCTAAGTCT
  AAGCTTGATT GTTGCTAATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323543551	CHEV_10_129441130	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223067567					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129839943 () rs orientation: forward

Symbol	Name	Function Class
Rr385497	regulatory region 385497	within coordinates
Tssr96487	transcription start site region 96487	282 bp upstream