rs223089052 SNP Detail

Summary

• ID
  rs223089052
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95722515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGATAGAA AAAGGGGAAC
  TTAGAGGGGA CACAGAGACT GCTGTAGTCT GAAAGGGAAG AAAGTCTGGA CAGATCTGTG
  CGTCTTCTTT GTCCCTCACT GCCTGCTCAA AGGTAGGTTT TTCCCTAATG TACATACCCT
  AAATTGGCCA AGGATGGGGG CCATAGTCTC CCATTGCAGA GGACGGGGTC ATAGTTACCC
  R
  TTGACCAAGC AGGAAACTGA GACCCACTGA GATGCAGGCT AGCTCAAGCT TCCAGGTTTA
  GAGACCCACT GAGAGGCAGG CTAGCTCAAG CTTCCAGGTT TAGGCAGCCT CTCTGTAGGT
  GCCACCTGGC TCTGAGAGGC AGATGCTGAC CCTGTGTACC GATTCGAAAG GCTGACCACA
  GTGGCTCATT GAATACAACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809836	CHEV_8_97519787	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223089052					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95722515 () rs orientation: forward

Symbol	Name	Function Class
Adgrg1	adhesion G protein-coupled receptor G1	within coordinates
Tssr78944	transcription start site region 78944	1560 bp downstream
Tssr78945	transcription start site region 78945	1497 bp downstream
Tssr78946	transcription start site region 78946	1454 bp downstream
Tssr78947	transcription start site region 78947	1166 bp downstream
Tssr78948	transcription start site region 78948	1098 bp downstream
Tssr78949	transcription start site region 78949	1084 bp downstream
Tssr78950	transcription start site region 78950	1035 bp downstream
Tssr78951	transcription start site region 78951	266 bp downstream
Tssr78952	transcription start site region 78952	193 bp downstream
Tssr78953	transcription start site region 78953	139 bp downstream
Tssr78954	transcription start site region 78954	126 bp downstream