rs223100877 SNP Detail

Summary

• ID
  rs223100877
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65413580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAGTTAGAG GGAATCCCAA GCCCGAGCTT
  GTATTAGAGA CCCTAAGGCT GTTCCATAGG AAATGGCTCT TTAGTGGTGT TCACAAGTGC
  TTCCTGGAAC AGCAatcaag taagaataat taagatttct atgacttcaa acggttacca
  S
  ttttatttgt tgaacattgt cagactttct atagtggtgt acattataga ttgttgcaga
  ccgtattgtt ctgccatgct atagaacact agaattaatt cTAAGAGTTC TCTTTCATAT
  GCTCAAATTC ACTCACAGAC TTAAATTTAA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324073056	CHEV_12_66467793	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223100877					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65413580 () rs orientation: forward

Symbol	Name	Function Class
Rr387346	regulatory region 387346	773 bp upstream