rs223109092 SNP Detail

Summary

• ID
  rs223109092
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:89039564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTTTGAA ATATATGAGA
  GACTTGGGTG ATGTCATTAT GCCTGTGGTT TTTGCTGCCA ATCATCCAGG TATATAAAAG
  GCCTGTGGCA GATGTTGAAA CACACACTCC AGAAACCTAC TGCTTAATCT TCCTCTGAAC
  ACTCCACTCC TGACAACATG TGCTACTACG GAGGATATTA TGGAGGCCTG GGCTATGGCT
  R
  TGGAGGCCTA GGCTATGGCT ATGGCTGTGG CTATGGTGGA TATGGTTATG GCTGCTGCCG
  CCCACTGTGC TGTGGAAGAT ACTGGTCTTA TGGCTTCTAC TGAGGACCTT ATGTAGAGAC
  CCAGCCTTTC TAACCAGAAG TGTTTCCAAG TGTTTTCACA CCTGAAACTC AAACATGTCT
  TCAAAAATTT CAACTATAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325272438	CHEV_16_89242921	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223109092					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:89039564 () rs orientation: forward

Symbol	Name	Function Class
Gm35004	predicted gene, 35004	within coordinates