rs223204011 SNP Detail

Summary

• ID
  rs223204011
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:42065852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACGTGATC TTACCAATTT
  GGATTTTCTA CGCTTTCCCG GAAGACAGAC TCTTCCCTCA TGGATGCATA CTGTGTCCAC
  GTGAGGCAGT GACTCCGGAT AGCCATGTTC CTTTTCTGAA GACTGAGCCA TGACTCTTCT
  TCTAGCTGGA TATCAGGTAC CTTTAAAATA CTCACCTGCC CAACAGAGAG AAAACAGCAT
  M
  CTCAATTTCA GAAGAGCAAG CTACATGAAG ACTCCACCTA GAGCCCATCT CAGTCTCGGA
  TAACAGGGGG GACAAGTGAC CCTTATATAT AGATGGCACG GCAGCAATAG CCCTAAGTAT
  TGATATCCAG ACACACTGTG GCCTCACTAC ATGCTGTGAA GGACTTGCAA ATGGCCCAGG
  ACTGATGGAG GCCACTAAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325596250	CHEV_18_42092441	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223204011					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:42065852 () rs orientation: forward

Symbol	Name	Function Class
D18Mit104	DNA segment, Chr 18, Massachusetts Institute of Technology 104	120 bp distal
Prelid2	PRELI domain containing 2	Intron