rs223266885 SNP Detail

Summary

• ID
  rs223266885
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90885674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gagagagag agagagagag agCTTTGCTC
  CCTAAATGGC CACACCTTGC CCCAGCAAGT GTCAAGAGAG AAACTTAACA GGAAGATGTT
  TTCTGGGGCT TTCTTCCCTG CTCAAGGACC TGAGTTTCTC TACAAGGATA AGAACTCACA
  S
  AATCACCATC AGAAGAACTC ACAGTCCACC CCAGACCAAT GCCTGTGCCC ACCCTCGTTA
  CACTCACCCC CATGAACCCT CACCATGTTT AACACCCACA AACCCATCTA GAACGTGTGC
  AGAAAAACTG AACAGGTGTG ACCCGTCGGG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319838450	CHEV_1_92854529	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223266885					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90885674 () rs orientation: forward

Symbol	Name	Function Class
Rab17	RAB17, member RAS oncogene family	181 bp downstream
Rr415504	regulatory region 415504	803 bp distal
Rr415505	regulatory region 415505	1049 bp distal
Rr415506	regulatory region 415506	902 bp distal