rs223286131 SNP Detail

Summary

• ID
  rs223286131
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:33066198 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGCCTGCC CTGCTTCTGT
  CTTATTAATG ATCTTGGCCA AGCAGTTTTG TTTCTTAGCC TCAGTACATC ATCTAGAATA
  GGACAACTAC AGAACTTTAG ATGACAGAGG CGGGAGTGGT AGGGGTGGCA TGTGGGAGGG
  GGGATCACAA TGCAGATTTG CTTGTCCAGA GCTCAGGGCA AGCTTTCAGA AGCCACCCAA
  W
  GCCTTCCAGG GCCAGAAGAC TTCCCGTCCA AATCCCCTCC CGATGTGGGA CCCCCTCCAG
  CCAGTCTCTG TAGGAGGAGA GGGTGACAAA ACAGAGGTTC AGGGTCCCCC CTCACTTTCC
  AGAGACAGTT ATCCTGAAGG CAGAGGATGG AAAGGGGGTG GCTGCACACT TCACATGTCC
  CATCCCGTGC CCCAGGAAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323633009	CHEV_11_33016198	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223286131					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:33066198 () rs orientation: forward

Symbol	Name	Function Class
Fgf18	fibroblast growth factor 18	1232 bp downstream
Rr239972	regulatory region 239972	998 bp distal