rs223360194 SNP Detail

Summary

• ID
  rs223360194
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34485388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAGAACCT AATGAAAGCA
  ATTAATGCAA TTAAAGATGA TTTGGGTCCC CAGTTCAGGC TACGGTCACA GCTGCAGGAG
  CTTGAGCAGC TGGTCACATG GCATCCAATC AGGAAGCAGA GGTGTGGTTG CTGTTGCTTG
  GTTTGCTTAT CCAGACCACG GGGTGGTATT GCTCACATAC AGGTTAGGTG GAAGACCTTC
  S
  CAATTAAGAC CAGCCCAGTT AACCTAATCC AGAAACCCCA TCACATGGCT CGTATTTGTT
  TCCATGGTGA CTCTAAATCC TGCCAGGTTG ACAGTCAAGA TCAACCACTA TAAGAACTCA
  CACTGAGCAG TGCCTTCTGG AAGATTCCTT CTAAAGGTGC AGAGTTAAGT AGCCTCCTGT
  TCTTCCATGA CACCCTTGTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701740	CHEV_3_34330161	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223360194					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34485388 () rs orientation: forward

Symbol	Name	Function Class
Gm20515	predicted gene 20515	within coordinates
Rr575127	regulatory region 575127	1424 bp proximal