rs223398817 SNP Detail

Summary

• ID
  rs223398817
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:111277255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCTGAGAG ACCTCTCTCT
  GGCTTTGCAC CCTGTCACCA CACTTCTGAC AGAGCATTTT GAGAGACTGC CTGCTAAAGC
  ACAGCTACTT TGCATACACT CCCAGGGGTG TGTACAGACA GCTCAACTCT GAGAGATGTC
  TGTGTGCTTA GCAAGGAACC AACCAGGCAG GAGAAATGTG ACCGAGGGGA AGTTGAAGTG
  G
  GGAAAGATAA TGGACTTAAC CACTGCAATT AAAACTTCCA ACTGTTGCCA GTTTTTCAGG
  ACTTGACTGG CTTGACGGGA CCGTGAAGGG GGCCTCCTGG GCTGAAACAT GCCTCAGTTG
  ATGTGAGGGG TTGGGGGAGA TAAAAATATT TCTCCCTCCT CAAGGAAAGG AGAATGGCAG
  AGGGCACTGT GTGTGTGTCT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323473610	CHEV_10_110878450	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223398817					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:111277255 () rs orientation: forward

Symbol	Name	Function Class
Gm67980	predicted gene, 67980	665 bp upstream
Rr225746	regulatory region 225746	within coordinates
Rr229875	regulatory region 229875	1583 bp distal