rs223475831 SNP Detail

Summary

• ID
  rs223475831
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:182356905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTCCTGCT TTCTATCATC ATCATCATCA
  TTATTCTGGT TCTGAGgctg agtatagtgg cacttgtctg taatcttggc actccagagg
  agaaacagat cagaaAAAAA tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
  W
  gagagagaga gagagagaga gagagagaga gagagagaga gagagTtcac tctttgtggc
  tgggtaatac tccacggtgt aaaggtagca cattttcttt gttcactcat cctctgaggg
  actgcctccc aggctgcctc ccgacctggc                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320163264	CHEV_1_184459471	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223475831					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:182356905 () rs orientation: forward

Symbol	Name	Function Class
Rr424952	regulatory region 424952	403 bp distal
Rr424953	regulatory region 424953	1616 bp distal