rs223486369 SNP Detail

Summary

• ID
  rs223486369
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13263765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATTTTCTG CCATCTGCTT
  CATCTGTGGT GGTTTCACCT CATCCTGCGG CCTTCTGTTG AACTCTCAGA GGCACTGAGG
  AGCCCTGACA GAGGGCAGGA AGTGGCTAAA CGAGAGTGCT TTTCCATCCT CTCAAGGCAG
  AACAAAACCA CAATACTCCC CTCTGCTGAA GGGGCCATTT TGGGGGCTGG GCCAGGGGCC
  R
  GAAGTATGTT CCTCCTAGAA GACAACATCA GGCCAGGGCA TGGAAGGCCC AACCCCTGCC
  ACAACCATAC CAGTAGGCAT TGTGCTCAGC AATGTTTTAG TGCTAAATGC AGTGTCCCAT
  TTAGAGTTCT AGGTCTTACC CCATCTCCCT AGAAACCCAG GCAATGACCT GTGAATTTGT
  GTGCCATGCC TGCCCCTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505134	CHEV_8_13213765	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223486369					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13263765 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	within coordinates
Rr368495	regulatory region 368495	within coordinates
Rr368496	regulatory region 368496	207 bp upstream
Rr659886	regulatory region 659886	260 bp distal
Rr659887	regulatory region 659887	302 bp distal
Rr659888	regulatory region 659888	268 bp proximal
Rr659889	regulatory region 659889	318 bp proximal