rs223529410 SNP Detail

Summary

• ID
  rs223529410
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107649476 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAATTCTC CAGCACCATG
  TCTGCCTACA CTCTGCCATG CTTCCGCCAT GATGATAATG GCCTGAACCT CTGAAACAAT
  AAGCCAGCCT CAATTAAATG GTTTCCTCTA TAAGAAGAGT TGCCTTAGTC ATAGTTGTCG
  CTTCACAGCA ATGGAAACCC TAACTAAGAC ATGTGGGAAC GAGGAAGAGG GATCCCACCC
  R
  GGAGGGAAGT CAGAAAGTGT CAGGTGACCT CAAAGCCTCA TGGGACCTGA GAGCTCATCT
  CCCAAGACCA ACCCAAGAAG AAACAGCTAG ACACTAGCAG GGACTTCATG CATGGAAGAA
  AGCTCCTAGG ATACTTACTG CATGTTGTTG TATTGAGGAG ATTTCCACAG ATGAGGGAGA
  CTGGAGATGG GTAAGCAATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321251325	CHEV_4_107464884	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223529410					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107649476 () rs orientation: forward

Symbol	Name	Function Class
Gm69341	predicted gene, 69341	within coordinates
Lrp8os3	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 3	870 bp downstream