rs223588159 SNP Detail

Summary

• ID
  rs223588159
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:45352084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTAGACCT GAAAGAAGAA
  GACCCATCCA TAAGACTTTA GAGAAGGACC AATGTGCCTA TTGCAAAGAA AAAGGACTGT
  GACTCAAATA CTGGCACTGG CTACTCCAAG ACAGGTGAGA GAATTCTTGG GCACTGCTGG
  GTTCTGCAGA CTTTGGATAC CTGGGTTTAC AACACTGGCT GCCCCCTTGT ACCCCCTGAC
  Y
  AAAGAAAGTA GAGAATTCAG ATGGACATCA AAATATCAGA GAGCCTTTGA AAATATTAAA
  GAGGCTCTGT TGACTGTGCC AGCCTTGGCA TTGCCAGATC TAACCAAACC CTTCATCCTC
  TATGTTAATG AGAGGACAGG GTGGCCAGAG GAGTTCTTAC TCAGGCTCTA GGGCCATAGA
  AGAGGCCCAT GACATATTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325607268	CHEV_18_45378671	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223588159					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:45352084 () rs orientation: forward

Symbol	Name	Function Class
Rr393647	regulatory region 393647	969 bp upstream