rs223627656 SNP Detail

Summary

• ID
  rs223627656
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:113943957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tcaaacaaa acaaaaCAAA AGCAAACAAA
  CAAGACATTG CATTTGTCCT CTAGTTTTGG CTAACGTTAG GGGCACTGCC AGTGACATTC
  TATGtattct ggtttcactt tcatcactgt gatagatagg aacatgatga ccaaaagcag
  Y
  ttaggggaga atgggtttat ttcagcttag agttccaggc tgtagtgtat cgttgaggaa
  ggcagggcag gaacccagac agtgagctat ggcacagcca cagtcagtag cagtgagaaa
  tgagtgtgcc cacactgcct gctgcttcct                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324532451	CHEV_13_114597629	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223627656					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:113943957 () rs orientation: forward

Symbol	Name	Function Class
Arl15	ADP-ribosylation factor-like 15	within coordinates
Rr274986	regulatory region 274986	within coordinates
Rr278337	regulatory region 278337	536 bp distal