rs223683854 SNP Detail

Summary

• ID
  rs223683854
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129841310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATTAAGCA TTACAAAAGA
  CGGAGCCAAC AGCTCAGGGC TGGTCTGCAA AATGTTTACT AGGACTATAA GGACACTCTT
  AACCAAATAA GGGTTTACCA TGAGAAAAGT TAGGGAATCC CACTGAGACA GGTTTCTTCA
  CTAGGCCCAA AGAATTCAGG CAGAACTATA GAACATAAAT AAATTTTATG CCTCAGTCCA
  R
  CCTTTCTTCT TAATAACAGG GAGGAGATGT AGCCTCTCAC AAGCCTGAAG CAGGCTGAGC
  CAGACCTTGA CTTTGTTGTC ACTAAGGAGA TTACGTAGGG TGGAGCCTAC CTCCCTGGAT
  CACTCTACTG TTCAGCCTCT GCTACTGCTG CTACCTGCTG GGAGTCAGCC TAGCTATTCG
  GAGTCTACAT CCAATCCTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323543563	CHEV_10_129442497	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223683854					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129841310 () rs orientation: forward

Symbol	Name	Function Class
Rr385497	regulatory region 385497	within coordinates
Tssr96487	transcription start site region 96487	1080 bp downstream