rs223725551 SNP Detail

Summary

• ID
  rs223725551
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83529950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATCTGTGG GCACTGGAAA
  GGTTTAAGCA CAATAAAACC CCCTGAAAAA GTAAATGATA CACTGAAAGC CTACAGGAGT
  TTTTTGCGCA TGTGGCTCAT CCAGGTTTCA AGGCTATAGA TAAGTTTGTC ACTCTATTTA
  GTAAGAAACT ATTCAACAGT GTCTTCAACA AGCCATAAAC TCCCCCTTAA AAAGTCCATC
  M
  CAAATTTATT TATCTACAGA AAAGCCAAAC TACCTCGACA TGATTTCAAT CAACAAAATA
  CTCTTTCAAT ACCCAACCAG CCACTTGAAT CAAGGTCATA AAAACAAGCC CTCCACTGAC
  AAGCATGCTC TAGAAAGTTC TAAGTCCAGA GGATAGACTC TTTTATCAAA CTGCCTAGAA
  CCTTCTATAA AGTCATAGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322294675	CHEV_7_91029252	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223725551					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83529950 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19376	CpG island 19376	1468 bp proximal
Gm74146	predicted gene, 74146	1423 bp upstream
Rr381056	regulatory region 381056	657 bp downstream
Tlnrd1	talin rod domain containing 1	within coordinates
Tssr2320	transcription start site region 2320	1476 bp upstream