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rs223751498 SNP Detail
Summary
  • ID
    rs223751498
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr14:47122494 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          CCCGG GTAAGTGCGC GGCCGTGGAT
    Y
    CCGCGGCTCC CCGGGAATCC AGTCT                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss324592437 CHEV_14_47504712 CHEVERUD SCREENING_POP f SNP C T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs223751498 SNP C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr14:47122494 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
2810457G06Rik RIKEN cDNA 2810457G06 gene within coordinates
Cpgi6376 CpG island 6376 within coordinates
Rr297079 regulatory region 297079 within coordinates
Samd4 sterile alpha motif domain containing 4 within coordinates
Tssr4382 transcription start site region 4382 987 bp downstream
Tssr125243 transcription start site region 125243 452 bp downstream
Tssr128301 transcription start site region 128301 8 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory