rs223752513 SNP Detail

Summary

• ID
  rs223752513
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:52466614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTATGTG CTCTCAAGAA TGGGTCCCGG
  ATGATGTAAT GAGTATTATG AGATCATCAC TACCAGGCCA CGATCCTCTC AGATGGTATC
  CATAGGTGAT ACTCTTCCCC CTCtgtctta gtcagggttt ctattcctgc acaaacatca
  Y
  gaccaagaag caagatgggg aggaaagggt tgatttggct cacacttcca tgctactgtt
  catcaccaaa gaagtcagga ctggaactca agcaggtcag gaagcaggag ctgatgcaga
  ggccatggag ggatgttctt tattggcttg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319720165	CHEV_1_52484299	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223752513					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:52466614 () rs orientation: forward

Symbol	Name	Function Class
Gm69377	predicted gene, 69377	within coordinates
Rr410861	regulatory region 410861	784 bp proximal
Rr410862	regulatory region 410862	1578 bp proximal