rs223774412 SNP Detail

Summary

• ID
  rs223774412
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119799278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACAAGACAG CCCAGGACTC GGCCCTATGG
  CCCTACATAG GAGCCGGGAA GGCCTGTCTG ATCAGGGCCT GAGTCCGTGG AGGAGTCTGT
  AGAGGTGATG AAGCTCCCAC CAAGTGCCCT AAATTACCAG AGAAACCTCT CAGAACCTTT
  S
  GAAGAGAGAC ACAGGATGCT GCACCCCCAG CTCGATCTCT GCCCAAGCGT TTCCCAGCCC
  CAGTGAGAGG GGACAGGACA ACAGGATGTT GCAGGGCACT TTATCCAGTC ACAGGTACTC
  ATGCCCAACT ACAGGCAGCC CGCCAAGTCC                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323223758	CHEV_9_119879330	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223774412					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119799278 () rs orientation: forward

Symbol	Name	Function Class
Csrnp1	cysteine-serine-rich nuclear protein 1	951 bp downstream
Rr688588	regulatory region 688588	within coordinates
Rr688589	regulatory region 688589	706 bp proximal