rs223779171 SNP Detail

Summary

• ID
  rs223779171
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97954380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAATGAACA AAGTAGAAAT
  TATCTTTCCT ACCATCAACC TCAGCCCCAC TTAAGCTTAT GGTCAAGCTG GAGAGGCAGA
  AATAGTTTGT TACGTCTTGC TAAGTGCTAT GCAAAAAAGG CAAAGCAGAG GAGAGAGTAA
  GGAAGGTAGA ACATAGATGG AACTTCAGAT TGGAGAAGCT AAAATGGATC TCACTCGAGA
  R
  GAGGCACCAG AGCGAAGGCT TTGTAGATAA GAGGAATCAG GCTAAGGACA GTGATGAAGA
  GAGACCATTT CAGGCAAGAA AAACAGGAGC TGAGCCCTCC TCCCACTCCA GGAATGACAA
  GATGCTCTAC TGATTGGAGA GAGGGCTGAG GACAGAGTAG TAGTAGATTA TAGAATCAAA
  GACATAAACA CAGATGTATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324132346	CHEV_12_99226331	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223779171					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97954380 () rs orientation: forward

Symbol	Name	Function Class
Rr387674	regulatory region 387674	107 bp upstream