rs223832509 SNP Detail

Summary

• ID
  rs223832509
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcactcagg aggcagaggc ggaggtggag
  gcaggaggat atctgtgagt tcaaggccag cctggtccac agagtgagtt tcaggacagc
  cagggctaca tagagaaatt ctgtctcaaC Caataactaa ctaactaact aactaaataa
  M
  taaataaata aataaatagt aaaaaataaa taaaaaataa aAGCTCTTAT TGTCATCATA
  GAGTCAGCTA AACCATAGCC ACAGCCACCA CTCAGCAGAC TAACACACAA GCGAGCAGTC
  CTTGGTGTGA TCAGTGCTTT CTCATAATGT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505145	CHEV_8_13214748	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223832509					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264748 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	668 bp upstream
Rr368495	regulatory region 368495	912 bp downstream
Rr368496	regulatory region 368496	575 bp downstream
Rr659886	regulatory region 659886	1243 bp distal
Rr659887	regulatory region 659887	1285 bp distal
Rr659888	regulatory region 659888	225 bp distal
Rr659889	regulatory region 659889	624 bp distal
Rr659890	regulatory region 659890	1723 bp proximal