rs223876852 SNP Detail

Summary

• ID
  rs223876852
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:133632286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGAGAAAGT AAGTATAGTA TATTGGTTGT
  TGTTTTTAAC CAATTACAAA CATACTGAGT CACCTGTCAT GCCAAACAGc tggtgatgct
  cctctccacg gtgtgacatg gtggcacttt atttgaaatt ctTTAAACAA TATATATATA
  K
  AGAGAGATAT AGATATAGAT ATATGGCTGA CTAATAAATG TCAGTTCCTG ACCTAAAGAA
  AACTATATTT TTTTGCATAA TATTTCTATA TTTTCTCTCT TACTATGGAA ACTACAGAAC
  ACGCATACAC AGAAAAACCT GTTGACTTTG                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319980797	CHEV_1_135601125	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223876852					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:133632286 () rs orientation: forward

Symbol	Name	Function Class
Atp2b4	ATPase, Ca++ transporting, plasma membrane 4	within coordinates