rs223916791 SNP Detail

Summary

• ID
  rs223916791
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:63566620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTAACCCTA CCCCCATCAT CTATGCCACC
  TGATTCGACA AACACTGCAC ACACTGTGTC TCCTCCCAAA ATCCATGTTG AAATCTTCTC
  ATGGAACACG ATGGCACAAG GGGGCTGAAA CCTCTGACGT GAATTAGTTT TCATAATTGG
  R
  ATAGAAGAGT GCACCCTCTG ACACTGAACT TGAAGCTGAC ATGAACTTGG CCTTCCGGCC
  TCTAGAAGGT CCTTCTGTTC TCAAGACTTC TGGTCCACGC ACGGCATATG ACAAGCAGCC
  CAAAAGATGA AGTCTAGAAA TGGTCCATGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322233696	CHEV_7_71061758	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223916791					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:63566620 () rs orientation: forward

Symbol	Name	Function Class
E030018B13Rik	RIKEN cDNA E030018B13 gene	mRNA-UTR
Gm53391	predicted gene, 53391	within coordinates
Klf13	Kruppel-like transcription factor 13	Intron
Rr647715	regulatory region 647715	154 bp distal
Rr647716	regulatory region 647716	617 bp proximal
Tssr66988	transcription start site region 66988	8 bp upstream
Tssr66989	transcription start site region 66989	369 bp upstream