rs223963558 SNP Detail

Summary

• ID
  rs223963558
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:70352242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGG GAATGGGGAG GGTATTCTAG
  C
  CTGCCATCTG TGTCTCAAAA GGCCT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322697754	CHEV_8_72423491	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223963558					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70352242 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20428	CpG island 20428	1803 bp proximal
Ndufa13	NADH:ubiquinone oxidoreductase subunit A13	Intron
Rr400887	regulatory region 400887	1939 bp upstream
Rr664594	regulatory region 664594	336 bp distal
Tssr81543	transcription start site region 81543	1542 bp downstream