rs223997015 SNP Detail

Summary

• ID
  rs223997015
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127726213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttcaagtta ctacttccta atgttccatc
  ttggctgctc tagacccagt tgagcagcct tctgggacgt gtcctctgca cccattacgt
  ggcagctctg ctcctctctc ctatcttcag catgacgtct ctctctctct ccacgctctc
  Y
  gaaagcaagg cagataacac tcactctctt tcctctaggt cccaagcccg ggaaacctaa
  aacacccgct tctctcttct ccctagctgt tttctgctga catctttatt aaccaatcag
  aattaactgg agacaggttc ccAGGAGCAC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323530338	CHEV_10_127327400	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223997015					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127726213 () rs orientation: forward

Symbol	Name	Function Class
Rdh7	retinol dehydrogenase 7	1527 bp upstream
Rr226507	regulatory region 226507	1013 bp distal
Rr226508	regulatory region 226508	within coordinates
Rr385469	regulatory region 385469	1438 bp upstream
Tssr99826	transcription start site region 99826	1682 bp upstream
Tssr99827	transcription start site region 99827	1594 bp upstream