rs224041024 SNP Detail

Summary

• ID
  rs224041024
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:56266095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGGAATAT TAAGCTACTA GTCATTCAGA
  TATTCACAGA TCAGAACATA GCACATAGAC ATAGCCTCTC TCCTGCCACC TACTGACGCG
  CATGTGACAC AGCAGTCACA ACTGCAAGGC CTCTGGGGGA AGGGGCTTCA GGTTTCTAAG
  Y
  CCACCTTGCT GCTTCTCTTT CTCCTTCCTT CTCCCCTCCT GTCACCCACT CTGAGACCTG
  GGTTTTCTCA CACACCCATA AAGTGATGCA TCCATTTCTA TACCTTCAGC TGACAATACC
  TAACACCAAC CAATCACAGT GTCAGACCCA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325856845	CHEV_19_56352153	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224041024					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:56266095 () rs orientation: forward

Symbol	Name	Function Class
Gm22271	predicted gene, 22271	18 bp upstream
Gm32257	predicted gene, 32257	within coordinates
Rr549993	regulatory region 549993	290 bp distal
Rr549994	regulatory region 549994	60 bp distal
Rr549995	regulatory region 549995	339 bp proximal
Rr549996	regulatory region 549996	365 bp proximal
Rr549997	regulatory region 549997	429 bp proximal