rs224051735 SNP Detail

Summary

• ID
  rs224051735
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23494015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGCGGTCCG TGGAGTCACT
  GCGTGTTGAA AAGAGTGGAG GACCAGCGCG CCCTAGTACG TCTCAAGGAC GAGTCCTCTC
  GGCTCATCCA CGCCTGTCCT GGGTCTCAGT GATGCCAAGC TCCTCTCAGC TTAAACTGTA
  GCTGTTCCAG AAGTTTTGGG GATCCCGGGG CTTCGTGGCG TTTTTTATCT GCCTCAGTGG
  R
  AACCGGAAGA GGCGACAGGG ATGCCCTTCG AGTCATTCGG TCTTTCTTTA GTGAAGTCGC
  GAAGGAGTTG GGAACTTGGG ATTCTGAAGT GAATATTTTC GGGTCGCCCA ATCTTGGTGA
  CAACGAATAT CTGTGACTCC GAAGTTTCCT GTAATTTCCA AGTCTGTAAC TGAAGAGGCC
  AAGGTAGCAC ATCAGCCTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324288367	CHEV_13_23401714	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224051735					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23494015 () rs orientation: forward

Symbol	Name	Function Class
4930557F10Rik	RIKEN cDNA 4930557F10 gene	within coordinates
4930597G05Rik	RIKEN cDNA 4930597G05 gene	within coordinates
Cpgi5346	CpG island 5346	within coordinates
n-TIaat9	nuclear encoded tRNA isoleucine 9 (anticodon AAT)	720 bp upstream
Rr475820	regulatory region 475820	1920 bp distal
Rr475821	regulatory region 475821	within coordinates
Tssr121691	transcription start site region 121691	308 bp downstream