TTTATCAAA AGTGCAAATC AAGGTTTTCC TGAGTTTCTC GCTGTGTGTG TTCTGCATTC TCCATGGGTA CAATCCTTCA GACACAGTTC TGtgctgtgt gccaggccct gtggtgtgca tatcggggcc taccgagtta gtaaggccag R ctctgccttc agggaacAAG GGCATTCTCC ATCGTGGAGA TATGAGACAC TGGGGAgtgg accactgctt gtagaccagg ctaccccact gacgctgagg caagaggcct caaggttgtg gccagccatc ctgagaaacc taacaatacc R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss323874763 | CHEV_12_4717443 | CHEVERUD | SCREENING_POP | f | SNP | G | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs224092077 | SNP | G | A |
Location: Chr12:4760637 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm53750 | predicted gene, 53750 | within coordinates | ||||||
Itsn2 | intersectin 2 | within coordinates | ||||||
Rr260648 | regulatory region 260648 | 837 bp distal | ||||||
Rr263604 | regulatory region 263604 | 1253 bp distal | ||||||
Tssr112576 | transcription start site region 112576 | 1699 bp upstream | ||||||
Tssr112577 | transcription start site region 112577 | 1718 bp upstream | ||||||
Tssr115645 | transcription start site region 115645 | 1578 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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