rs224095781 SNP Detail

Summary

• ID
  rs224095781
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147018802 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATAG TGTCGCCCCC TCCCCCCCGG
  S
  CCATGGGACC AGTCTTAACC AACTT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320548147	CHEV_2_147002618	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224095781					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147018802 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12376	CpG island 12376	1411 bp proximal
Cpgi12377	CpG island 12377	1760 bp proximal
Nkx2-2	NK2 homeobox 2	664 bp downstream
Rr566759	regulatory region 566759	720 bp proximal
Rr566760	regulatory region 566760	992 bp proximal
Rr566761	regulatory region 566761	1386 bp proximal