rs224119352 SNP Detail

Summary

• ID
  rs224119352
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83571096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTATTCTGA TTACATCCTG
  GGCCTGCCTG GCTTTGAGTG TGTGTGTGTC TGGAACAGGG CAGGCACCCA CCTGACAGCC
  AGGGATCAAC AGATGACAAA GACTGGATGT ATAGGGAAAA ATAACAGTGT TAAACAGACT
  TCTCCCCGTT TTCGCTTTTA TCTCAACATG GCTTAGAATC TAGATTCCTA AATTGCACAG
  Y
  ATCCTAATAG CTTGGTATAT CAACGAAATG CTACTGAAGG TAGACTCAAC TAAGGAAACT
  CTGTTGAACG GAAATAGGGA TTATAAAATA CTATACTCCC AGCATTGTAA TGCCTATGCA
  GTCAGTTCCC AGCCACCACA TGGTGGCTCA TAACCATCTG TAATGGCATC CGATGCCACC
  CTCTGGTGTG TCTGAAGACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324113666	CHEV_12_84865272	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224119352					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83571096 () rs orientation: forward

Symbol	Name	Function Class
Dcaf4	DDB1 and CUL4 associated factor 4	within coordinates
Rr257993	regulatory region 257993	105 bp proximal
Rr265648	regulatory region 265648	1704 bp proximal
Tssr114259	transcription start site region 114259	1721 bp upstream