rs224131404 SNP Detail

Summary

• ID
  rs224131404
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:42064828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCACAAAGA CTGTAGTATC
  TAATTATAGC AGCTCAAACC AAGATTCCCT AGATCTCAAA TTGTGTGTGT CCTGAAAACC
  AGCCCACAGT ACTTTAAAAC TAACATATAA GGCATACACC ATAGAACTCA CTTACTTAAG
  ATCACACATT TCAGAGGAAT TTACCTACAG GGTTAGGCAG GAACTGGGAC AGTTGTGACA
  S
  GAGTTTACAT ATTTGTGAAA ACTTAAAGAG CTGAATGCTA GAAAAGGTAA ATTTGATTGT
  CTATAGATAA TCTTGCAACA AATACAACAC TTAAAGATTC CACTGAGAGA ATCCACTCAC
  ATATCACATT AGAGTCATAT GTAGAGGACA TACAACTCAC TCACGTATCA CATTAGAGTC
  ATCTATAGAG GACATACATC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325596239	CHEV_18_42091417	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224131404					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:42064828 () rs orientation: forward

Symbol	Name	Function Class
D18Mit104	DNA segment, Chr 18, Massachusetts Institute of Technology 104	756 bp proximal
Prelid2	PRELI domain containing 2	Intron