rs224142265 SNP Detail

Summary

• ID
  rs224142265
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105720750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTCTGAG TCTGGGCCTG
  GGAATGCAGT TCAGTTGCTA GAGTGCTTGT CTAGAATGTG TAAAGCGCTT GGTTTAATGA
  CCAACACTAC ATAAACCAAG TGCGGTGGCA TGTGCCTGGA ATCCCGGGGA ATCAGAAATT
  CAAGGTCATC CTTGCCTACA AAGTGAATTC CAGGCCAGCT TGGGCTACAC AAAACTTTAT
  Y
  TTTTAAAAAA ACAAACAAGG GCTACAGAGA TGGCTCAGAA GTTAGGAGCC TGACTGCTCT
  TCCAGAGGTC CTGAGTTCAA GTCTCAGCAA CTACCTTGTG ACTCACAACC ATCTGTAATG
  GGACCCAATG TGCTCTTCTG GTGTGTCTGA GTTCAACTAC AGCTACTCAT ATAAATAAAA
  GTAAATAACT CTTTTAAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863260	CHEV_3_105616352	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224142265					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105720750 () rs orientation: forward

Symbol	Name	Function Class
Rr582787	regulatory region 582787	1641 bp proximal