rs224148295 SNP Detail

Summary

• ID
  rs224148295
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4761815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCCCTAGT AGGCAACACA GCCTGGAGGA
  GGAACGAATT CTGGCTGCTA ATGCCAGAGC ACTAGCAGGT GATAGGAGTT AGTCCAGGGC
  TAAAGCTCTA GTTGATTAGA GAGACACACA TCAGGAGCTG GAAGCATAGC CAATGGCAGA
  R
  CGTGGTTAAG AAGCATGGGG GTCCATTTCC AGCATCAGAG AGTGTGTGAG AATAGACAGA
  AGCCCTACAG CATTGCCTTT TCACTGTGGT GGTCGTCTAC ATTCCCAGAG TAACACGACT
  CACTTCCTCT TTTGTAGCCC GTTCTCAAAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323874780	CHEV_12_4718621	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224148295					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4761815 () rs orientation: forward

Symbol	Name	Function Class
Fam228a	family with sequence similarity 228, member A	1855 bp downstream
Gm53750	predicted gene, 53750	within coordinates
Itsn2	intersectin 2	within coordinates
Rr260649	regulatory region 260649	986 bp proximal
Tssr112576	transcription start site region 112576	521 bp upstream
Tssr112577	transcription start site region 112577	540 bp upstream
Tssr115645	transcription start site region 115645	400 bp downstream