rs224198578 SNP Detail

Summary

• ID
  rs224198578
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106763786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAC TCCGGAGCCG CGGTGGAGCC
  G
  GGACCCGCGG GTTCCGCCCC GGGGG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323187614	CHEV_9_106788918	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224198578					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106763786 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22277	CpG island 22277	within coordinates
Rbm15b	RNA binding motif protein 15B	within coordinates
Rr401656	regulatory region 401656	591 bp upstream
Rr686406	regulatory region 686406	683 bp proximal
Rr686407	regulatory region 686407	831 bp proximal
Rr686408	regulatory region 686408	1428 bp proximal
Tssr86941	transcription start site region 86941	150 bp downstream
Tssr91351	transcription start site region 91351	472 bp downstream
Tssr91352	transcription start site region 91352	516 bp downstream