rs224239841 SNP Detail

Summary

• ID
  rs224239841
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:31182282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTACACGT TCATGTTCCT
  GGTTCGATCC AATTCAGAGA CTGCATTAAA TTATGTATTT TTAGTCTCTT TAATCAGGAG
  CAGTTTCTTG GGCTTTGTCT TTTACTATAT TAATACATTT TCCATGTCAG ATGAGTCATG
  TTCCCACAGA ATAAGGCTTG AAGGAGGTCT CACATGTGGC ATAAAAACCG AATCATTAAG
  S
  TTGTGAGCCA CAAAAGGATC CCTTAATATT TTTAAGAAGT GAGCAGGCCA GTGATTATGT
  AGAATGCCCC TTACTTAGGG GTTGGCTTTT GTTTTCTTAT GGTTAGATTC CAGTTGCTAG
  CTTTGAGTAG CTATGTTGCA GAAGTGAAGC TTGCGTGGTT CTCTAAGGAT CAGCTGCAGA
  AGTTCACAGA ATCTACTGCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322889684	CHEV_9_31078571	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224239841					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:31182282 () rs orientation: forward

Symbol	Name	Function Class
Gm51733	predicted gene, 51733	within coordinates
Gm69959	predicted gene, 69959	within coordinates
Rr194404	regulatory region 194404	282 bp distal
Rr208622	regulatory region 208622	within coordinates