rs224251268 SNP Detail

Summary

• ID
  rs224251268
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185318540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTTCCAA AGGTAAAAGT
  ACTGTTGAGC CTCATTCCCC AAAGCTGCAA GCTTGGTCTT ACCTGTCTCA TGGCAGCCCA
  AGCTATGACA TGGCACGTCT CAGGAATGTG TATCATCTGA ATCGGCTGAG TTCAGACTGC
  CTTCCTGTCC CACATTTTTC TGTGTCTGTT GCTCCCAACT ATTTCGCACT TCCTGTTGCT
  Y
  CTCCTCCTAC TTGCTGAGTG ACCACACACT GCTTCCCATG GTCTGTATCA ACAACTAGAG
  TCTGTTGGTC TTTCCGAGGT GCTGTCTGTG AGCATGTCCC CTTAGCCATC CACCTCTGTG
  AGAACCTGCT TTCTGGTCTG ATTTGACTCT TAGCGAAGCT AAATGTTCAC GCACCGTCTT
  TGGCAACCGA AGACTTTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320177545	CHEV_1_187410222	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224251268					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185318540 () rs orientation: forward

Symbol	Name	Function Class
Rr425414	regulatory region 425414	954 bp distal
Rr425415	regulatory region 425415	1303 bp proximal