rs224252675 SNP Detail

Summary

• ID
  rs224252675
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:45627906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACATAGAGA GGCTGTAGTG TGCTTGGAGT
  CACCCAAGTG GTTAGAATTC ACTGGCAGAC TTTGAGATAA CTTATGTGGA TAAATGCATG
  CTTACAGAGA TTCAGATTTA TCTTAGGTTT TTATTATTAA ATCAACATTT CCATTATTTT
  R
  GTATAAAGAA AGAAGTCTGC AGTGATGTGT GTGCTTTTGT AAAGAAAATA TAACAGCAAT
  GCttttattt ttttttatat tattttCTGC TAACCAAAAT GGTATTTGTA GTGGCTCACA
  GATATAAGAT TATATTAATG TTTGTCTGGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320276514	CHEV_2_45593414	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224252675					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:45627906 () rs orientation: forward

Symbol	Name	Function Class
Gm13465	predicted gene 13465	within coordinates
Rr556487	regulatory region 556487	1291 bp distal