rs224264651 SNP Detail

Summary

• ID
  rs224264651
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79492912 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTCTCT CTCTCTCTCG
  TACCTCTCAG AAGTAAATGA CAGTGTTTCC CATTCAGGTT TACCTGGCAC ATGAGCCGTC
  CCATGGTGGA CACTTACAGC TAAGCCCTCC TCCCCACAGC ACAGCACCGC CCTCGGCTCT
  CTGTCCTGGG TAGACATGAA CACATTACTT AACCAGCTCT GTCAAACATG CCCTTTCCCT
  Y
  CTCCTTCACC GGCCCCTGCC TCCCAGACAG CCACCCTGGC TGATGCTCAT CCCGACGTTG
  ATCCAGCTCA CCCCCTTCTC CTCACAGCCT CTAGCAGACC CTGCTGTAGT CTCATGAATT
  CCCTGCTTCC AGCAGACCCC TTAAAACTAC TCATCACGCG TCGCCGGTAC ATTCCACTGT
  TTCAAATCTT CCTTTTGCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss372032972	MGP_WTSI_7_86988050	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs224264651					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss372032972	MGP_WTSI_7_86988050	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79492912 () rs orientation: forward

Symbol	Name	Function Class
Anpep	alanyl aminopeptidase, membrane	within coordinates
Gm71751	predicted gene, 71751	within coordinates
Tssr67371	transcription start site region 67371	1325 bp downstream
Tssr67372	transcription start site region 67372	1074 bp downstream
Tssr67373	transcription start site region 67373	655 bp downstream
Tssr67374	transcription start site region 67374	615 bp downstream
Tssr67375	transcription start site region 67375	579 bp downstream
Tssr73165	transcription start site region 73165	1459 bp upstream
Tssr73166	transcription start site region 73166	1427 bp upstream
Tssr73167	transcription start site region 73167	1225 bp upstream
Tssr73168	transcription start site region 73168	1204 bp upstream
Tssr73169	transcription start site region 73169	1167 bp upstream
Tssr73170	transcription start site region 73170	1148 bp upstream
Tssr73171	transcription start site region 73171	1063 bp upstream
Tssr73172	transcription start site region 73172	1051 bp upstream
Tssr73173	transcription start site region 73173	1033 bp upstream
Tssr73174	transcription start site region 73174	947 bp upstream
Tssr73175	transcription start site region 73175	919 bp upstream
Tssr73176	transcription start site region 73176	862 bp upstream
Tssr73177	transcription start site region 73177	836 bp upstream
Tssr73178	transcription start site region 73178	810 bp upstream
Tssr73179	transcription start site region 73179	745 bp upstream
Tssr73180	transcription start site region 73180	655 bp upstream
Tssr73181	transcription start site region 73181	589 bp upstream
Tssr73182	transcription start site region 73182	577 bp upstream
Tssr73183	transcription start site region 73183	538 bp upstream
Tssr73184	transcription start site region 73184	111 bp downstream
Tssr73185	transcription start site region 73185	1360 bp downstream