rs224289231 SNP Detail

Summary

• ID
  rs224289231
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134528338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTGAGGGCC TGGGCCACGG
  AGGCTGTGAG TGAGGCCCAC AGCTGCTGGG CACATCGAAG TCCATGTCAC ACGTACAGCT
  GTCGGGCCTG TCTTAGAGCG ACTCCTTGCA GGTCAGACCT TGCAGGGAGG CCCTGGAGAG
  TCCAAGCGCT CTGAATTTTG TCACAGATTC AAGAAGCAAC ACCCCTCAGG GCTGATGGCA
  R
  AGCTGGGGGC TGATGCCTAC CATGTGGTAC GCGTGGCCAG ACCACAGGGC TCCTGGTGGA
  CCACAGAACA ACAGGGGTGG CTTTCCTTGG CAAGTGCTTG AGGGCTAGGG ATGGCTAAGT
  GGTTAATTAC GATACAAACC TCAGAACAGG AGCTGGGGGT CCTCAGAAGC CACACAAGGA
  CCACGTGCAC ACCTTCAGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321349613	CHEV_4_134356942	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224289231					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134528338 () rs orientation: forward

Symbol	Name	Function Class
Maco1	macoilin 1	1732 bp downstream
Rr601835	regulatory region 601835	1260 bp distal
Rr601836	regulatory region 601836	1519 bp distal