GAAGCACAT GGTCCCAAAG GGACGTGTCT AGTCATGAAA CAGGATGAGC ACAAGCCTGC TCTTTACATG CAATAACAAC ACTCTGTTTC TTTGTTTTCC AGAGGTGCAT AATAACACTA CTAGATTTTA ATCTATGTAT AAGAAAAAAA M CACTCTAAAT AGGAAAGATA AATTATCCTT CTTAGACACA AGTGCATCCT GAAGGGGTCT TTTTGTTGCG TGTAGCCTCC CGGAACACAC CCAGTTTCTT TTCTTTTTAC TGTCCTCTGT TATGCTGGTT AGAGAAATAG ATTCAGGTAA M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss320342308 | CHEV_2_72241403 | CHEVERUD | SCREENING_POP | f | SNP | A | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs224310699 | SNP | A | C |
Location: Chr2:72233690 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Map3k20 | mitogen-activated protein kinase kinase kinase 20 | within coordinates | ||||||
Rr50274 | regulatory region 50274 | 90 bp distal | ||||||
Rr62486 | regulatory region 62486 | 511 bp proximal | ||||||
Rr367212 | regulatory region 367212 | 1748 bp downstream | ||||||
Tssr18342 | transcription start site region 18342 | 1906 bp upstream | ||||||
Tssr18343 | transcription start site region 18343 | 1992 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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