rs224317113 SNP Detail

Summary

• ID
  rs224317113
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101206671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCTTGCA TGTAACACTG
  ACTCTTACAA AGGAGATCCA ATGCCAGCCT TCTTCCCTTA ATTATTTGCC ATGATTGCTT
  TTCCTCCAGA CAACATAATC ATGGTGACTA TCTTAGCCTA ATCGCCTAAT CCCAAGGCCA
  ATGCACTGTA TTGTACAGAT GATTTCAGGA GGAAAGATGA GCTTGAACAA ATGAGCTTCC
  Y
  AGGCAGTCTC CAAACTTCAC ATTAATTAAT CATTTCAGCC CTCTTCCTCG GTAAACTTGT
  AACCAGAGCA GGTAACAGTG AGCAAACGGA TAGGCTTGAA GTTCATCTTC TTTTGTTTTC
  CTTGCTCATT CTCTGGAAAA GGGGCTAACG AGCAGTAAAA TGACCAGGCA CAGGATTCCA
  GAAGAGACGA GAGAGAGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323149618	CHEV_9_101231802	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224317113					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101206671 () rs orientation: forward

Symbol	Name	Function Class
Rr198413	regulatory region 198413	within coordinates