rs224326496 SNP Detail

Summary

• ID
  rs224326496
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:115641914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTACATTAC TGATCTACTG TAGTATTGAC
  TTAAATGATA TAAATTTTAT ATACATCTGG ACTTGAGGTA ATTATTATGT AATGATGCTA
  GTATTCTACT ACTTTGGAGT AATTTATAGG ACGTGTGACA GAACAGAAAA TACAGACTAT
  W
  GCTGACACGT CATTAGCAAT CTGTAGTTCT CTTAGCAGTC ATCCTCCCAA GCTTTCCAAT
  TTGGCCCTTC CTTCTTCTTA GCCATTAAAT GAAAGAAGAT ACATTAAAAT TATGAACTTC
  TATTTATGCA GCTAACAATC TGCAAATATA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916350	CHEV_6_115614971	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224326496					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115641914 () rs orientation: forward

Symbol	Name	Function Class
Raf1	v-raf-leukemia viral oncogene 1	Intron
Rr637013	regulatory region 637013	880 bp distal
Rr637014	regulatory region 637014	1431 bp proximal
Tssr58319	transcription start site region 58319	1999 bp upstream