rs224340424 SNP Detail

Summary

• ID
  rs224340424
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74598358 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTGCCTCT GCCTCTGCCG GCACCCCCAT CCCCAACACC
  ATGTCTTTTT AACTACAATG CTGCAGGATA TTTGATCACA CTGTATGTAA AACACAACAT
  Y
  GTGAACTAGA AAACCCTTGT GTGGCTCAGC CCTGGAAGAC ACCATTAATC CAAAGTGGTT
  CTGTAAAACA AAATTAACGA AGTGAACCAT AGGTCAAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323749433	CHEV_11_74521034	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224340424					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74598358 () rs orientation: forward

Symbol	Name	Function Class
D11Mit352	DNA Segment, Chr 11 Massachusetts Institute of Technology 352	57 bp distal
Pafah1b1	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	within coordinates
Rr386282	regulatory region 386282	105 bp downstream
Tssr109134	transcription start site region 109134	1902 bp upstream