rs224352057 SNP Detail

Summary

• ID
  rs224352057
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60214010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTGACTT GTCTGTGTTT
  GGGGTTGTGT TAGCGCTTCA CCTTGACCTT GGGTCTGAGA TAGGATTCAA GCCTTTGGGT
  CTCTGGTAAG CAGAGAGGGG TTCTGGAATA TTCTTTTGCA ACCCTCTGGA GTCGTGATGA
  CACACTGAGC CGGTTTGTAG GGGAGTTCAG CGTTGCCTTG GTGGCCTCTA GGCTCTCGGC
  Y
  TCTGAAGAGG AGCAGTGTGG GCTGCTTAGA ACCTCATGGT GCACAGGCCA GGCCCAAGAC
  CTCAGCAGCC ACTGTAGTCA GCGTGGTACT TCACTGTGCA GCAGAAGCAG GCCAGGTGGG
  GTTCTATTGG CCATTGCATA TGTGGGGAAA CTGAGGCCCA GCCAAACAGA AGAAATGATT
  TGTCCAAGGA CCTACTATGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323325209	CHEV_10_59840979	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224352057					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60214010 () rs orientation: forward

Symbol	Name	Function Class
Cdh23	cadherin related 23 (otocadherin)	within coordinates
Rr432129	regulatory region 432129	1837 bp proximal
Tssr97724	transcription start site region 97724	1991 bp downstream