rs224361439 SNP Detail

Summary

• ID
  rs224361439
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117584672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGGCACCG CTTGCTTAGC
  CTTACCAAGG ACAGTCCCTG TTTTCTTTTT CTTTCTTTTT TTTTTTTTTC CGAGACAGGG
  TTTCTCTGTG TGGCCCACGC TGTCCTGGAA CTCACTCTGT AGACCAGACT GGCCCGGAAC
  TAAGAAATCC GCCTGCCTCT GCCTTCCAAG TGCTGGGATT AAAGGAGTGC CCCACCATTT
  Y
  CGGCTTCCCT GTTTTCAAAG CTCACCAGCT CTTACTGTTT GCTAGAAATA GTCCCATTGT
  CACCCTCCCC TACACGTGTG TGGATTACCC TTCCCTGCTC CCTCAGTAAG AGCCTGGGAA
  GTGTTCTGGC TAGGTGTGAT GGAGTACAGT TTCAGTCCCA GTCCCAGGAG TGGGAGGGCA
  GAGGCCTGTG GATCTCTGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499203	CHEV_10_117185823	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224361439					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117584672 () rs orientation: forward

Symbol	Name	Function Class
Gm66856	predicted gene, 66856	744 bp downstream
Nup107	nucleoporin 107	1854 bp downstream
Rr439612	regulatory region 439612	1926 bp distal