rs224375351 SNP Detail

Summary

• ID
  rs224375351
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:63072684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCAGGTC CAACTCTGTG
  GACAGGAAGC CATGGTTACT GACTCTGAAG GGACGTTGAC CAAGCACAAT AGAGTTCAGA
  CCCTAGAAAG GTTTCATTAA AGGTCAACTT TCCCCAGGGA GAACAGGGGA TGGGGCAGTC
  AGGCAGTGTC TGGCCTGTCC CTCCAGTTCT TCCCCCAAGA TCTCAGAAGA TACAGGTAGC
  Y
  TGGTTCTGGC TTCTTTCTCA TATAACAAAA CTAAGGCCCA GGGAAGTTGG CTATAGAGCA
  AAGCATCCTT CCTCCCAAGA CTCTCCCTCT GGTCTCCAAC CTCTCATAGC CATTAAGATA
  ATCAGGACAG GGAGAGATGC TATCCCTTCA CCGAGCCACA CTGGTTTCCC ACAGTGAAAC
  CATCAGTACC CAGATGAACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321144510	CHEV_4_62815481	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224375351					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:63072684 () rs orientation: forward

Symbol	Name	Function Class
Ambp	alpha 1 microglobulin/bikunin precursor	275 bp upstream
Rr593478	regulatory region 593478	2 bp distal
Tssr37530	transcription start site region 37530	1855 bp downstream
Tssr37531	transcription start site region 37531	1794 bp downstream
Tssr42025	transcription start site region 42025	1819 bp upstream
Tssr42026	transcription start site region 42026	1777 bp upstream
Tssr42027	transcription start site region 42027	1761 bp upstream
Tssr42028	transcription start site region 42028	1741 bp upstream
Tssr42029	transcription start site region 42029	297 bp upstream
Tssr42030	transcription start site region 42030	150 bp upstream
Tssr42031	transcription start site region 42031	343 bp downstream
Tssr42032	transcription start site region 42032	390 bp downstream