rs224393579 SNP Detail

Summary

• ID
  rs224393579
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:120439345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGGAGGG ATGCTTGCAG
  GCTAGCCCTC AAGATGCTAC TTTGTAACTG TAATCTTGCT ACTGTTATGA CTCCTGTGAA
  AGAATCATTT GACCTCCAAA GGGATCATGA CTTACAGACT GAGAATTGCT CATGTGGGGG
  TGGTCATCTG TAGCTTCCAG ATTAGGGTAA TTGAGGTAGT AAGAGGGGAG GCCAGAGTGA
  Y
  AGGTAGAGTC AGGTTTAGAA GGCTCCTGCT CTGGGCTTTT CCCAGATGGG CACTCAGCCA
  TCCAACAAGG CTGGACATTA GAACTACCAG CCTGTAACCC CCAGAGGACT CCTCTGAGTC
  TGGGTTCCAA AGCTGTCTTT ACTATATTGG AGAGACACCA CCTCCAGGAG TGCAGTGAGC
  AAGCAGGATG CTGAGATGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323229194	CHEV_9_120519396	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224393579					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:120439345 () rs orientation: forward

Symbol	Name	Function Class
Gm39456	predicted gene, 39456	1643 bp downstream