rs224490855 SNP Detail

Summary

• ID
  rs224490855
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107905296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGTGC GTGTGTGTGT GTGTGTGTGT
  R
  TGCACATTCA TGTGTCTGTG TGTAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324151911	CHEV_12_109177247	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224490855					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107905296 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
Rr387761	regulatory region 387761	707 bp downstream
Tssr117636	transcription start site region 117636	375 bp upstream
Tssr117637	transcription start site region 117637	346 bp upstream
Tssr117638	transcription start site region 117638	288 bp upstream
Tssr117639	transcription start site region 117639	269 bp upstream
Tssr117640	transcription start site region 117640	253 bp upstream
Tssr117641	transcription start site region 117641	236 bp upstream
Tssr117642	transcription start site region 117642	198 bp upstream
Tssr117643	transcription start site region 117643	79 bp upstream
Tssr117644	transcription start site region 117644	22 bp downstream
Tssr117645	transcription start site region 117645	53 bp downstream
Tssr117646	transcription start site region 117646	93 bp downstream
Tssr117647	transcription start site region 117647	109 bp downstream
Tssr117648	transcription start site region 117648	169 bp downstream
Tssr117649	transcription start site region 117649	195 bp downstream
Tssr117650	transcription start site region 117650	233 bp downstream