rs224532421 SNP Detail

Summary

• ID
  rs224532421
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44381610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCACTTTC AGAAGACCCG
  AGTTCAATTC CCAGCACCCA CATGAGGCAG CTCACAATCA CCTGTAACTT CAGCTCCGAG
  GATCTCTGCA AATGCCAGCA TGTACCCACA CTTGCACACA GACACACATA TACATCATAA
  GAAATAAAAC AAACCTTTAA GATAATAGGA AAGATGAGCT GGAGAGTTGG CTCAGCTAAG
  W
  GTACTTAGTG TTTGTCCCGT GGACCCAGGT TTGGCTCCCA GCACTCACAT GAAGTGGCTC
  ACAACCATCC GTAACTCTAG TTTCATGGGA CCCATCACCT CTGGCCTTTG GTGGTATCTG
  CACTCATGTG CACATACCCA CTTGCACTCT CGTGTGCTTG TGCACCCCCC CCACAACTAA
  AAATAATAAA AATAAAAATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100992	CHEV_4_44394482	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224532421					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44381610 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	846 bp distal
Gm12455	predicted gene 12455	1312 bp upstream
Gm68903	predicted gene, 68903	within coordinates
Rr89080	regulatory region 89080	191 bp proximal