rs224552499 SNP Detail

Summary

• ID
  rs224552499
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:151850969 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTGAGTCA ACAGCTCCCT CCCCCTCAGA
  GATTAAGCTA CTTTTGTTCT ACTTGAAAAC AAATTAGCAC AGTGCCAGAA TAGTCTGTGG
  GACCTTGAAT GTGCCCCGCT CAAGTGACAC AAAAGTGCCG GCATCTGGGG AAAGGAAGAC
  R
  TCCAAGATTG ATAAAGAGGC ACAGCACCTT TCCCGCTATC CCTCTTATGC ACAGCCAACG
  GGGGTGGGGG GAGAAGGAAG CCACCAAAGC CCTCCCCTCA CCTACTCTGC CCTTCTCTAG
  CTGATGATCA TCCAGAAGAT CTTCAGGCTG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320061192	CHEV_1_153822348	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224552499					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151850969 () rs orientation: forward

Symbol	Name	Function Class
1700025G04Rik	RIKEN cDNA 1700025G04 gene	Intron
Rr420390	regulatory region 420390	within coordinates
Rr420391	regulatory region 420391	199 bp proximal